| 92 |
PL92-DP-Functional Proteomics |
02/11/2026 |
To be collected |
Not yet |
Dorian Puzovic |
Functional Proteomics |
Cancer Biology |
ICR |
3 |
DP01 Strep pulldowns |
Human |
Pull down |
DIA |
ACN1 |
— |
fernandojs |
Strep pulldowns, digested and resuspended … |
edit |
| 91 |
PL91-SB-Funcprot |
12/18/2025 |
Ready to Run |
Not yet |
Sreejan Bandyopadhyay |
Funcprot |
Cancer Biology |
ICR |
1 |
90 peptides. LF, TMT6 and … |
Human |
Peptides |
Single shot |
ACN1 |
— |
fernandojs |
|
edit |
| 86 |
PL86-FS-Functional Proteomics |
09/26/2026 |
Running... |
Not yet |
Fernando Sialana |
Functional Proteomics |
Cancer Biology |
ICR |
2 |
non tryptic MHC peptides for … |
Human |
Peptides |
Single shot |
LMS01 |
— |
fernandojs |
FP01 VPAESAAVL FP02 APHARNGLSL FP03 … |
edit |
| 81 |
PL81-SB-Functional Proteomics |
09/02/2025 |
Ready to Run |
Not yet |
Sreejan Bandyopadhyay |
Functional Proteomics |
Cancer Biology |
ICR |
3 |
3 dilutions for HNSCC non-tryptic … |
Human |
Peptides |
Single shot |
- |
— |
fernandojs |
Peptides were: AGLDWGLLLS AGLPVFAP AYWGQGTL … |
edit |
| 70 |
PL70-SB-Choudhary |
05/22/2025 |
Ready to Run |
Not yet |
Sreejan Bandyopadhyay |
Choudhary |
Cancer Biology |
ICR |
1 |
Tryptic peptides from external collaboration … |
Human |
Peptides |
Single shot |
ACN1 |
RDS FUNCPROT |
fernandojs |
SB02 |
edit |
| 69 |
PL69-SB-Choudhary |
05/22/2025 |
Ready to Run |
Not yet |
Sreejan Bandyopadhyay |
Choudhary |
Cancer Biology |
ICR |
1 |
Non-tryptic non-canonical HLA peptides from … |
Human |
Peptides |
Single shot |
ACN1 |
RDS FUNCPROT |
fernandojs |
SB01 from MEM004 |
edit |
| 68 |
PL68-MP-Choudhary |
05/09/2025 |
Ready to Run |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
1 |
MP101: ARID1A_N-GFP, ARID1A_C-GFP and GFP … |
Human |
Pull down |
IPs TMT |
- |
— |
fernandojs |
Labelled with TMT10plex #RG234622. Not … |
edit |
| 67 |
PL67-MP-Choudhary |
04/28/2025 |
Ready to Run |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
307 |
MP100 - ARID1A PRISMA |
Human |
Other |
DIA |
- |
— |
fernandojs |
|
edit |
| 62 |
PL62-MP-Choudhary |
03/28/2025 |
Ready to Run |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
307 |
MP99: ARID1A IDR PRISMA |
Human |
Pull down |
DIA |
- |
— |
fernandojs |
Samples resuspended in 32 ul … |
edit |
| 58 |
PL58-ED-Choudhary |
02/19/2025 |
Sample Prep |
Not yet |
Eric Deustch |
Choudhary |
Cancer Biology |
ICR |
96 |
synthetic peptides (inhouse) |
Human |
MHC peptides |
Single shot |
ACN1 |
— |
fernandojs |
|
edit |
| 57 |
PL57-ED-Choudhary |
01/22/2025 |
Sample Prep |
Not yet |
Eric Deustch |
Choudhary |
Cancer Biology |
ICR |
2 |
synthetic peptides from external datasets |
Human |
Peptides |
Single shot |
ACN1 |
— |
fernandojs |
|
edit |
| 50 |
PL50-MP-Functional Proteomics |
10/23/2024 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
84 |
MP95 ARID1A PRISMA validation 3-ways |
Human |
Pull down |
DIA |
- |
— |
fernandojs |
These are PRISMA samples, resuspended … |
edit |
| 49 |
PL49-MP-Functional Proteomics |
08/16/2024 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
6 |
MP92_IPs to identify immunogenic protein |
Human |
Pull down |
Single shot |
- |
— |
fernandojs |
Sample names are: F7, F8, … |
edit |
| 48 |
PL48-FS-Choudhary |
07/12/2024 |
Finished! |
Not yet |
Fernando Sialana |
Choudhary |
Cancer Biology |
ICR |
4 |
DIA and DDA of phosphopeptides |
Human |
Peptides |
Single shot |
ACN1 |
— |
fernandojs |
300ug lysate, C18 cleaned, IMAC … |
edit |
| 47 |
PL47-MP-Functional Proteomics |
06/21/2024 |
Finished! |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
9 |
MP90 ARID1A_N-GFP, ARID1A_C-GFP and GFP … |
Human |
Pull down |
IPs TMT |
- |
— |
fernandojs |
Labelled with TMT10plex. Not mixed … |
edit |
| 46 |
PL46-MP-Choudhary |
06/17/2024 |
Finished! |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
2 |
TMT for A and D … |
Human |
Pull down |
IPs TMT |
ACN1 |
— |
fernandojs |
|
edit |
| 45 |
PL45-MP-Choudhary |
05/05/2024 |
Finished! |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
2 |
ARID1A pulldown |
Human |
Protein complex |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 44 |
PL44-FS-Choudhary |
05/05/2024 |
Finished! |
Not yet |
Fernando Sialana |
Choudhary |
Cancer Biology |
ICR |
4 |
synthesized peptides (CRBN, IKZF3) |
Human |
Peptides |
Single shot |
FSN |
— |
fernandojs |
|
edit |
| 43 |
PL43-M-Choudhary |
04/03/2024 |
Finished! |
Not yet |
Mercedes |
Choudhary |
Cancer Biology |
ICR |
30 |
MP88-PRISMA |
Human |
Pull down |
DIA |
FSN |
— |
fernandojs |
|
edit |
| 42 |
PL42-NM-Choudhary |
03/01/2024 |
Finished! |
Not yet |
Nichol Matthews |
Choudhary |
Cancer Biology |
ICR |
18 |
NM31 |
Human |
Cell pellet |
Total proteome deep |
LMS01 |
— |
fernandojs |
|
edit |
| 41 |
PL41-AN-Choudhary |
02/23/2024 |
Finished! |
Not yet |
Anya Nicholas |
Choudhary |
Cancer Biology |
ICR |
15 |
membrane proteomics for ARID1A KO |
Human |
Cell pellet |
Total proteome deep |
LMS01 |
— |
fernandojs |
|
edit |
| 40 |
PL40-AS-Choudhary |
02/22/2024 |
Finished! |
Not yet |
Aleksandra Stanisic |
Choudhary |
Cancer Biology |
ICR |
4 |
TOX4 ips and IgG control |
Human |
Pull down |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 39 |
PL39-AN-Choudhary |
01/02/2024 |
Finished! |
Not yet |
Anya Nicholas |
Choudhary |
Cancer Biology |
ICR |
2 |
TMT premix membrane proteomics |
Human |
Cell pellet |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 38 |
PL38-AS-Choudhary |
01/27/2024 |
Finished! |
Not yet |
Aleksandra Stanisic |
Choudhary |
Cancer Biology |
ICR |
1 |
IgG TOX1 |
Human |
Pull down |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 36 |
PL36-MM-Functional Proteomics |
01/01/2024 |
To be collected |
Not yet |
Miriam Melake |
Functional Proteomics |
Cancer Biology |
ICR |
4 |
|
Human |
MHC peptides |
Targeted MS2 |
ACN2 |
— |
fernandojs |
|
edit |