| 40 |
PL40-AS-Choudhary |
02/22/2024 |
Finished! |
Not yet |
Aleksandra Stanisic |
Choudhary |
Cancer Biology |
ICR |
4 |
TOX4 ips and IgG control |
Human |
Pull down |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 39 |
PL39-AN-Choudhary |
01/02/2024 |
Finished! |
Not yet |
Anya Nicholas |
Choudhary |
Cancer Biology |
ICR |
2 |
TMT premix membrane proteomics |
Human |
Cell pellet |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 38 |
PL38-AS-Choudhary |
01/27/2024 |
Finished! |
Not yet |
Aleksandra Stanisic |
Choudhary |
Cancer Biology |
ICR |
1 |
IgG TOX1 |
Human |
Pull down |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 37 |
PL37-PB-Frankel |
01/01/2024 |
Running... |
Not yet |
Priyanka Bishwas |
Frankel |
- |
External academic |
15 |
Citrobacter sorted, old mice |
Mouse |
Sorted cells |
Total proteome deep |
LMS01 |
— |
zuzak |
|
edit |
| 36 |
PL36-MM-Functional Proteomics |
01/01/2024 |
To be collected |
Not yet |
Miriam Melake |
Functional Proteomics |
Cancer Biology |
ICR |
4 |
|
Human |
MHC peptides |
Targeted MS2 |
ACN2 |
— |
fernandojs |
|
edit |
| 35 |
PL35-MP-Functional Proteomics |
12/13/2023 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
54 |
PRISMA eluate samples (MP88) |
Human |
Pull down |
DIA |
FSN |
— |
fernandojs |
Please run same amount and … |
edit |
| 34 |
PL34-MP-Functional Proteomics |
12/01/2023 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
3 |
MP87_S, MP87_N, MP87_Rb SIN3A, NFIC … |
Human |
Pull down |
Single shot |
- |
— |
fernandojs |
Please run in order R, … |
edit |
| 33 |
PL33-ZK-Choudhary |
01/01/2023 |
To be collected |
Not yet |
Zuza Kozik |
Choudhary |
Cancer Biology |
ICR |
18 |
SET02 RPE1 wt (KC)_R1 RPE1 … |
Human |
Cell pellet |
Total proteome shallow & Phosphoproteome |
ACN1 |
— |
zuzak |
|
edit |
| 32 |
PL32-ZK-Choudhary |
01/01/2023 |
To be collected |
Not yet |
Zuza Kozik |
Choudhary |
Cancer Biology |
ICR |
18 |
SET02 RPE1 wt (KC)_R1 RPE1 … |
Human |
Cell pellet |
Total proteome deep & Phosphoproteome |
ACN1 |
— |
zuzak |
|
edit |
| 31 |
PL31-ZK-Choudhary |
01/01/2023 |
To be collected |
Not yet |
Zuza Kozik |
Choudhary |
Cancer Biology |
ICR |
18 |
SET01 1 RPE1 wt (KC)_R1 … |
Human |
Cell pellet |
Total proteome shallow & Phosphoproteome |
ACN1 |
— |
zuzak |
|
edit |
| 30 |
PL30-ZK-Choudhary |
11/28/2023 |
To be collected |
Not yet |
Zuza Kozik |
Choudhary |
Cancer Biology |
ICR |
18 |
SET01 1 RPE1 wt (KC)_R1 … |
Human |
Cell pellet |
Total proteome deep & Phosphoproteome |
ACN1 |
— |
zuzak |
|
edit |
| 29 |
PL29-MP-Functional Proteomics |
11/17/2023 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
37 |
PRISMA Transcription factors pilot MP86 |
Human |
Pull down |
DIA |
FSN |
— |
fernandojs |
Samples in plate, I've emailed … |
edit |
| 28 |
PL28-M-Choudhary |
11/01/2023 |
Ready to Run |
Not yet |
Miriam |
Choudhary |
Cancer Biology |
ICR |
18 |
MM35_premix 18plex of HNSCC cell … |
Human |
Cell pellet |
Total proteome deep |
- |
— |
fernandojs |
|
edit |
| 27 |
PL27-MP-Choudhary |
10/01/2023 |
Finished! |
Not yet |
Mercedes Pardo |
Choudhary |
Cancer Biology |
ICR |
36 |
MP83_TF1 PRISMA samples |
Human |
Pull down |
DIA |
FSN |
— |
fernandojs |
|
edit |
| 26 |
PL26-MM-Choudhary |
10/23/2023 |
Ready to Run |
Not yet |
Miriam Melake |
Choudhary |
Cancer Biology |
ICR |
6 |
MM34 - FFPE tissue whole … |
Human |
Tissue |
Total proteome deep |
FSN |
MM34 |
fernandojs |
|
edit |
| 25 |
PL25-SJ-Frankel |
10/16/2023 |
Ready to Run |
Not yet |
Sarah Jordan |
Frankel |
- |
External academic |
4 |
|
Mouse |
Gel band |
Single shot |
LMS01 |
— |
fernandojs |
|
edit |
| 24 |
PL24-MP-Functional Proteomics |
10/12/2023 |
Sample Prep |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
2 |
MP85_SIN3A IP |
Human |
Pull down |
Single shot |
- |
— |
fernandojs |
Standard IP SIN3A & IgG … |
edit |
| 23 |
PL23-MP-Functional Proteomics |
10/11/2023 |
Ready to Run |
Yes |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
6 |
MP84_ARID1A IP in cell cycle |
Human |
Pull down |
IPs TMT |
- |
— |
fernandojs |
IP in 6 cell cycle … |
edit |
| 22 |
PL22-MP-Functional Proteomics |
09/14/2023 |
Ready to Run |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
44 |
MP83_ARID1A |
Human |
Other |
DIA |
- |
— |
fernandojs |
Samples resuspended in 32 ul … |
edit |
| 21 |
PL21-PB-Frankel |
09/05/2023 |
To be collected |
Not yet |
Priyanka Biswas |
Frankel |
- |
External academic |
12 |
PB67_PBS_EPCAM+ CR- PB67_CRWT_EPCAM+ CR+ PB67_CRm12_EPCAM+ … |
Mouse |
Sorted cells |
Total proteome deep |
ACN1 |
— |
zuzak |
|
edit |
| 20 |
PL20-MM-Choudhary |
08/07/2023 |
Running... |
Not yet |
Miriam Melake |
Choudhary |
Cancer Biology |
ICR |
1 |
ALAAVVTEV |
Human |
MHC peptides |
Targeted MS2 |
ACN1 |
— |
fernandojs |
|
edit |
| 19 |
PL19-GD-Functional Proteomics |
07/28/2023 |
Finished! |
Not yet |
Gianluca Degliesposti |
Functional Proteomics |
Cancer Biology |
ICR |
0 |
|
Human |
- |
Total proteome deep |
FSN |
— |
gianlucad |
|
edit |
| 18 |
PL18-MP-Functional Proteomics |
07/27/2023 |
Sample Prep |
Not yet |
Mercedes Pardo |
Functional Proteomics |
Cancer Biology |
ICR |
1 |
ARID1A IPs in synchronised cells |
Human |
Pull down |
IPs TMT |
- |
— |
fernandojs |
I'm interested in phospho sites … |
edit |
| 17 |
PL17-BS-Functional Proteomics |
07/13/2023 |
Ready to Run |
Not yet |
Bharath Sampadi |
Functional Proteomics |
Cancer Biology |
ICR |
48 |
Sandhya Visweswariah | GUCY2C project … |
Mouse |
Peptides |
Total proteome deep |
ACN1 |
— |
bharaths |
They sent us 60ug of … |
edit |
| 16 |
PL16-BS-Functional Proteomics |
07/06/2023 |
Finished! |
Not yet |
Bharath Sampadi |
Functional Proteomics |
Cancer Biology |
ICR |
24 |
Priyanka | Gad Frankel | … |
Mouse |
Tissue |
Total proteome deep |
ACN1 |
— |
bharaths |
Sample pooling scheme: Per sample … |
edit |